PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Mapoly0002s0031.1.p
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Marchantiophyta; Marchantiopsida; Marchantiidae; Marchantiales; Marchantiaceae; Marchantia
Family Trihelix
Protein Properties Length: 216aa    MW: 24380.8 Da    PI: 7.4093
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Mapoly0002s0031.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix31.54.5e-10111195286
             trihelix   2 WtkqevlaLiearremeerlrrgk....lkkplWeevskkm.rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 
                          W  +e+ +Li +r++ +  +++g     ++++lW+ v+ ++  e++ ++  kqC+  w+ l k+y  + +g+k++     + +p+f++++
  Mapoly0002s0031.1.p 111 WATNEIEHLILMRTSADGLFKQGVkekfSIMKLWDFVAGQLpGEGQARKDGKQCQWMWNMLMKEYTDVLTGAKEK-----KDFPHFEEMD 195
                          9********************8743445889**********66777788**********************9984.....568*****98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF138377.2E-9110196No hitNo description
Sequence ? help Back to Top
Protein Sequence    Length: 216 aa     Download sequence    Send to blast
MRSFLRSSSR ALTLFHNYRS LMMGSTACGN VSPGTEGRGR NCNVNDQEQA PDSTVGVTDI  60
ALHYQRQSFV TSAPEPFGVM SVYDTIFLKT LRIVNEQGAT LVSRVLERTF WATNEIEHLI  120
LMRTSADGLF KQGVKEKFSI MKLWDFVAGQ LPGEGQARKD GKQCQWMWNM LMKEYTDVLT  180
GAKEKKDFPH FEEMDQVWKC TSSADVERDL TCSPK*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G63420.13e-09Trihelix family protein